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Publications

 

Algorithms FOR STUDIES ON COMPLETE PROKARYOTIC GENOMES:

Replichore Viewer algorithm

Chore Viewer algorithm

Coding Genome Scanner (CGS) algorithm

 

ALGORITHMS FOR studies oN a single gene:

VVTAK / VVK Sliding Window algorithms

VVTAK Long Sliding Window algorithm

VVK in length algorithm

Stems and Loops algorithm

VVK Dinucleotides algorithm

 

ALGORITHMS FOR STUDIES ON PROTEIN-LIGAND INTERACTIONS

VVTAK Mn(II) algorithm

 

Algorithms for studies on a set of homologous nucleotide sequences:

VVTAK / VVK VarInvar algorithms

VVK Consensus algorithm

 

Algorithms for studies on multiple nucleotide sequences:

VVK Protective buffer algorithm

VVK in group algorithm

CodonChanges algorithm

 

ALGORITHMS for STUDIES ON a single amino acid sequence:

VVK Unique Antigen algorithm

Mutational Pressure Simulator

PentaFOLD

 

ALGORITHMS for STUDIES ON PDB FILE:

VVTAK Connecting Bridges

PentaFOLD 2.0

 

Algorithms for acyclovir-resistance checking:

HSV1TKphylo, HSV2TKphylo and VZVTKphylo algorithms

 

Data base for HIV1 gp120 epitopes:

Alignments of sequences coding for gp120 3D epitopes

 

Special issue of the "Frontiers in Bioscience"

edited by Vladislav Khrustalev

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